The stand-alone version is able to perform high-throughput annotation of thousands of sequences.

The PANNZER stand-alone version is now available! To download the PANNZER program package, click here.

Download databases from here. (7GB) (Database v.1.0)

System requirements:
1. Linux OS
2. Python 2.x (
3. MySQL database (
4. NCBI blastall version 2.2.21 (

The PANNZER installation and usage manual can be found here.


Download the stand-alone version of PANNZER tool