Click here to download the files after signing the license agreement
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M A X S P R O U T
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Current Version (Oct 2006)
(1) MaxSprout is a fast database algorithm for generating protein backbone and
side chain co-ordinates from a C(alpha) trace. The backbone is assembled from
fragments taken from known structures. Side chain conformations are optimized
in rotamer space using a rough potential energy function to avoid clashes.
(2) Reference:
Holm L & Sander C (1991). Database algorithm for generating protein backbone
and side chain co-ordinates from a Ca trace. Application to model building
and detection of co-ordinate errors. J Mol Biol 218:183-194.
(3) Unzip and untar the distribution file, then read the INSTALL file for build
instructions, testing and usage.
(4) The MaxSprout Server can be found here: http://www.ebi.ac.uk/maxsprout
(5) Author contact: liisa.holm'at'helsinki.fi
(6) Availability: academic licence. Commercial use is prohibited.
Please complete this licence agreement form, sign, keep a copy,
and return by paper mail to:
Liisa Holm
Biocenter 2 (Viikinkaari 5)
PO Box 56
FI-00014 University of Helsinki
Finland
or fax it:
FAX: +358 (9) 191 59079
cut here:
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ACADEMIC LICENCE AGREEMENT
FOR THE PROGRAM MaxSprout
BY Liisa Holm
An academic licence agreement for the MaxSprout program
(c) L. Holm 1987-2006
is granted to ....................................
in exchange for the following commitments:
I hereby certify that
(1) I am an academic user at an academic research institution. In
using the software, We will respect the interests of the authors
and their institutions.
(2) I will not use the software in commercial activities without
a written commercial licence agreement; commercial activities
include, in particular, work under contract from a commercial
company.
(3) I will not redistribute the software to others outside of my
immediate research group. I will suggest to other interested
research groups to contact the authors directly. When I leave
my current institution, I will either delete the software or
reapply for a new licence.
(4) I will not alter or suppress the run-time copyright message.
(5) I will acknowledge the program authors on any publication of
scientific results based in part on use of the program and
cite the article in which the program was described [Holm L
& Sander C (1991). Database algorithm for generating protein
backbone and side chain co-ordinates from a Ca trace.
Application to model building and detection of co-ordinate
errors. J Mol Biol 218:183-194].
(6) I will report evidence of program bugs to the authors.
(7) I will send the source code of any bug corrections and program
extensions, major or minor, to the original authors, for free
academic use. If I have made major extensions which are incor-
porated by the authors, I reserve the right to be appropriately
included in any future commercial licence agreement.
(8) I will not extract part of the software, e.g. modules or sub-
routines, for use in other contexts without permission by the
authors.
(9) I will not use the program in the context of classified research.
Purpose of research:
Full name and institutional address:
Email address:
Date: Signature:
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