Remote Homology Detection and Fold Assignment
The Global Trace Graph (GTG) is a pruned, all-against-all alignment graph of a non-redundant
representative set of all known protein sequences.
In this server, the concept of transitive alignment is used to trace paths through the graph between
your query protein and putative homologues via sets of intermediate neighbours. If any of these
homologues represent PDB structures, then folds can be assigned to your query protein. You can view
alignments between your query sequence and up to 50 best homologues, and will also be given a set of
links to various databases where you can view information about each homologue.
disabled, you can view the entire help page «here»
SCOP: 1.71 | PDB: 13/02/2007 | Pfam-A: v21 | PairsDB: v2