Protein Structure Database Searching by DaliLite v. 3
The Dali server is a network service for comparing protein structures in 3D.
You submit the coordinates of a query protein structure and Dali compares them
against those in the Protein Data Bank (PDB).
You receive an email notification when the search has finished. In favourable cases, comparing 3D structures
may reveal biologically interesting similarities that are not detectable by
Requests can also be submitted by e-mail to dali-server at helsinki dot fi. The body of the e-mail
message must contain atomic coordinates in PDB format.
If you want to know the structural neighbours of a protein
already in the Protein Data Bank (PDB), you can find them in the Dali Database
If you want to superimpose two particular structures, you can do it in the pairwise DaliLite
If you can spare a minute,
tell our master organization how you like Dali. We are the second group (Holm) of
the first platform (Bioinformatics).